Software

ArenaWormTracker

This MATLAB software suite analyzes C. elegans behavior in microfluidic arenas.  Published in Albrecht & Bargmann, Nature Methods 2011.

20AnFrame8bit_AVG_stream_Nov 13 13_27_valve4_mov013

Neurotracker

This ImageJ software package tracks fluorescent calcium signals in neurons of freely behaving animals. Published in Larsch et al., PNAS 2013.